Are you running the 2.1 beta? If so, you can dump mutator loader and use only UTMapLists.ini.
If you're still on 2.0, then keep the mutators common to both game profiles in the mutator loader .ini, and move the others into UTMapLists.ini.
If you're still on 2.0, then keep the mutators common to both game profiles in the mutator loader .ini, and move the others into UTMapLists.ini.
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